Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm6104-201ENSMUST00000078030 603 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Snora30-201ENSMUST00000083325 130 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.44□□□□□ -1.7
Col8a1Q00780 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.44□□□□□ -1.7
Col8a1Q00780 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col8a1Q00780 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm12285-201ENSMUST00000117347 233 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm12149-201ENSMUST00000117511 654 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm11268-201ENSMUST00000118347 267 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm14517-201ENSMUST00000119040 337 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm6797-201ENSMUST00000119440 512 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm14815-201ENSMUST00000120060 488 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm17014-201ENSMUST00000120765 168 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm23206-201ENSMUST00000122720 184 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm5699-201ENSMUST00000152491 723 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm25365-201ENSMUST00000158852 121 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm23864-201ENSMUST00000177607 107 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm29334-201ENSMUST00000190334 357 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm43405-201ENSMUST00000198642 337 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm7721-201ENSMUST00000200446 546 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm43418-201ENSMUST00000201334 428 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.43□□□□□ -1.7
Col8a1Q00780 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm18487-201ENSMUST00000215826 878 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col8a1Q00780 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm5045-201ENSMUST00000027054 810 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm23875-201ENSMUST00000083711 318 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm16261-201ENSMUST00000096813 205 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Fus-202ENSMUST00000079045 2623 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
Col8a1Q00780 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.43□□□□□ -1.7
Col8a1Q00780 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col8a1Q00780 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Col8a1Q00780 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.43□□□□□ -1.7
Col8a1Q00780 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col8a1Q00780 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Snord72-201ENSMUST00000104549 81 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm11829-201ENSMUST00000121003 282 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm22960-201ENSMUST00000122517 104 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm23545-201ENSMUST00000158205 104 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm26362-201ENSMUST00000158865 315 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Mir6960-201ENSMUST00000183449 61 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm43444-201ENSMUST00000198123 291 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms