Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm42539-201ENSMUST00000197009 308 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm43624-201ENSMUST00000197368 180 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm43142-201ENSMUST00000198670 361 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm2522-201ENSMUST00000204280 322 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm44757-201ENSMUST00000206373 157 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm44648-201ENSMUST00000208267 329 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm3816-201ENSMUST00000209803 433 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.67□□□□□ -1.66
LdlrP35951 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.67□□□□□ -1.66
LdlrP35951 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.67□□□□□ -1.66
LdlrP35951 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.67□□□□□ -1.66
LdlrP35951 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LdlrP35951 Gm22155-201ENSMUST00000083836 162 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.67□□□□□ -1.66
LdlrP35951 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.67□□□□□ -1.66
LdlrP35951 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LdlrP35951 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 Mir676-201ENSMUST00000102443 89 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm13250-201ENSMUST00000117209 753 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm11633-201ENSMUST00000118176 444 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm14919-201ENSMUST00000120839 390 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm15168-201ENSMUST00000121057 316 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm26347-201ENSMUST00000157526 131 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm26373-201ENSMUST00000157833 103 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm5258-201ENSMUST00000165437 327 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Mir7074-201ENSMUST00000183884 63 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm27690-201ENSMUST00000184596 126 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm5372-201ENSMUST00000187540 409 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 Gm37418-201ENSMUST00000195031 274 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm6719-201ENSMUST00000202067 335 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm17811-201ENSMUST00000206193 387 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm44923-201ENSMUST00000206673 85 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm20304-201ENSMUST00000218168 444 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm3086-202ENSMUST00000221248 310 ntBASIC4.66□□□□□ -1.66
LdlrP35951 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.66□□□□□ -1.66
LdlrP35951 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Ear14-201ENSMUST00000049559 468 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LdlrP35951 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LdlrP35951 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
LdlrP35951 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.66□□□□□ -1.66
LdlrP35951 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LdlrP35951 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LdlrP35951 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LdlrP35951 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.65□□□□□ -1.66
LdlrP35951 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
LdlrP35951 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LdlrP35951 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LdlrP35951 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
LdlrP35951 Gm14163-201ENSMUST00000117342 217 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Gm11200-201ENSMUST00000121698 448 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LdlrP35951 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.65□□□□□ -1.67
LdlrP35951 Gm26098-201ENSMUST00000157247 288 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Gm24636-201ENSMUST00000158673 288 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Gm16114-201ENSMUST00000161930 300 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LdlrP35951 Gm9071-201ENSMUST00000165915 474 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Mir3104-201ENSMUST00000174911 63 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.65□□□□□ -1.67
LdlrP35951 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms