Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm18100-201ENSMUST00000200897 452 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm43975-201ENSMUST00000203023 481 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm44852-201ENSMUST00000207950 369 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm18116-201ENSMUST00000220920 537 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm2645-201ENSMUST00000223516 547 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Snord42a-201ENSMUST00000082606 65 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.62□□□□□ -1.67
Pcdh1F7BJK1 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm9043-201ENSMUST00000119677 314 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm25966-201ENSMUST00000157169 117 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm22791-201ENSMUST00000157232 145 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm24402-201ENSMUST00000157873 91 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm23030-201ENSMUST00000158004 273 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm22940-201ENSMUST00000158560 155 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm26024-201ENSMUST00000158657 322 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Mir3572-201ENSMUST00000175549 86 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm23047-201ENSMUST00000177661 94 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm22951-201ENSMUST00000179471 107 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm6055-201ENSMUST00000180532 378 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm4854-201ENSMUST00000185902 574 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm32447-201ENSMUST00000194265 697 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm19418-201ENSMUST00000197436 580 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm42579-201ENSMUST00000200512 734 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm35648-201ENSMUST00000202304 475 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm44011-201ENSMUST00000203336 394 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm45105-201ENSMUST00000207824 397 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm7675-201ENSMUST00000208828 686 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 AC127242.4-201ENSMUST00000221242 470 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 AC123665.4-201ENSMUST00000228790 249 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Olfr575-201ENSMUST00000084812 957 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm6177-201ENSMUST00000085589 465 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Pcdh1F7BJK1 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Pcdh1F7BJK1 Gm24350-201ENSMUST00000104163 133 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms