Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.96□□□□□ -1.29
Trim35Q8C006 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim35Q8C006 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Trim35Q8C006 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Trim35Q8C006 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.96□□□□□ -1.29
Trim35Q8C006 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim35Q8C006 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Trim35Q8C006 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim35Q8C006 Mir599-201ENSMUST00000102378 88 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm22671-201ENSMUST00000104420 134 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm12635-201ENSMUST00000117285 752 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm14782-201ENSMUST00000120151 195 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm23782-201ENSMUST00000157939 120 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm23762-201ENSMUST00000158348 106 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm19815-201ENSMUST00000175818 335 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim35Q8C006 Mir378d-201ENSMUST00000184232 110 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Mir8120-201ENSMUST00000185035 139 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm37349-201ENSMUST00000194205 624 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim35Q8C006 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim35Q8C006 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC6.96□□□□□ -1.3
Trim35Q8C006 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim35Q8C006 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim35Q8C006 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Trim35Q8C006 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
Trim35Q8C006 AC113059.3-201ENSMUST00000217423 2777 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm12112-201ENSMUST00000117772 231 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm6952-201ENSMUST00000118629 159 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm13992-201ENSMUST00000120558 156 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm20690-201ENSMUST00000177341 315 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Mir6987-201ENSMUST00000184789 73 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm24826-202ENSMUST00000197298 216 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim35Q8C006 AC127371.1-202ENSMUST00000228923 306 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm24966-201ENSMUST00000082443 79 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.95□□□□□ -1.3
Trim35Q8C006 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim35Q8C006 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Trim35Q8C006 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim35Q8C006 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim35Q8C006 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm13560-201ENSMUST00000121865 329 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm23740-201ENSMUST00000157385 100 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm26312-201ENSMUST00000157769 165 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Mir1930-201ENSMUST00000158799 84 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm3585-201ENSMUST00000173438 875 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm29604-201ENSMUST00000187176 163 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm29383-201ENSMUST00000188284 480 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm37689-201ENSMUST00000193139 275 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Trim35Q8C006 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm5154-201ENSMUST00000203971 399 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm23734-201ENSMUST00000083753 109 ntBASIC6.94□□□□□ -1.3
Trim35Q8C006 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim35Q8C006 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms