Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm26501-201ENSMUST00000178307 107 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Gm24168-201ENSMUST00000178825 107 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox18P43680 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Gm45380-201ENSMUST00000210465 315 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.69□□□□□ -1.5
Sox18P43680 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.69□□□□□ -1.5
Sox18P43680 AC154603.1-201ENSMUST00000224355 313 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox18P43680 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC5.69□□□□□ -1.5
Sox18P43680 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox18P43680 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sox18P43680 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox18P43680 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox18P43680 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Sox18P43680 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox18P43680 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.69□□□□□ -1.5
Sox18P43680 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox18P43680 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Sox18P43680 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Sox18P43680 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox18P43680 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox18P43680 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sox18P43680 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Sox18P43680 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Sox18P43680 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.68□□□□□ -1.5
Sox18P43680 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Gm14890-201ENSMUST00000117660 676 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm12074-201ENSMUST00000120189 219 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm13424-201ENSMUST00000122301 354 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm22345-201ENSMUST00000122644 107 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm13901-201ENSMUST00000137252 468 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm25883-201ENSMUST00000157781 271 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm24940-201ENSMUST00000158326 108 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm24767-201ENSMUST00000158509 95 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.68□□□□□ -1.5
Sox18P43680 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox18P43680 Gm16378-201ENSMUST00000179168 342 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Mir6343-201ENSMUST00000183584 84 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm27545-201ENSMUST00000184755 202 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm37692-201ENSMUST00000192633 232 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm8242-202ENSMUST00000193056 475 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Trbv11-201ENSMUST00000194354 260 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC5.68□□□□□ -1.5
Sox18P43680 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Gm44817-201ENSMUST00000205416 453 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm7407-201ENSMUST00000208301 568 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm8523-201ENSMUST00000211386 552 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm18904-201ENSMUST00000218756 329 ntBASIC5.68□□□□□ -1.5
Sox18P43680 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm2614-201ENSMUST00000223227 403 ntBASIC5.68□□□□□ -1.5
Sox18P43680 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.68□□□□□ -1.5
Sox18P43680 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox18P43680 Gm10064-201ENSMUST00000071235 399 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm5265-201ENSMUST00000076828 342 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm26446-201ENSMUST00000082455 103 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Mir412-201ENSMUST00000083636 80 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Sox18P43680 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Sox18P43680 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Robo2-210ENSMUST00000226478 8059 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.68□□□□□ -1.5
Sox18P43680 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox18P43680 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox18P43680 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
Sox18P43680 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.67□□□□□ -1.5
Sox18P43680 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox18P43680 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox18P43680 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.67□□□□□ -1.5
Sox18P43680 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox18P43680 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.67□□□□□ -1.5
Sox18P43680 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox18P43680 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox18P43680 Gm11398-201ENSMUST00000120330 320 ntBASIC5.67□□□□□ -1.5
Sox18P43680 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.67□□□□□ -1.5
Sox18P43680 Gm25383-201ENSMUST00000157810 144 ntBASIC5.67□□□□□ -1.5
Sox18P43680 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox18P43680 Gm27820-201ENSMUST00000183628 175 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms