Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm22352-201ENSMUST00000083917 107 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Smc5-206ENSMUST00000226111 3265 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm25097-201ENSMUST00000104042 145 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13681-201ENSMUST00000117925 210 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14874-201ENSMUST00000118995 438 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14647-201ENSMUST00000119392 680 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14175-201ENSMUST00000119835 241 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm23964-201ENSMUST00000157966 107 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Mir6413-201ENSMUST00000184049 108 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm29147-201ENSMUST00000186846 315 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm18177-201ENSMUST00000188373 404 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm28160-201ENSMUST00000191229 315 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm18036-201ENSMUST00000195256 272 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43804-201ENSMUST00000198280 456 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm18116-201ENSMUST00000220920 537 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 AV026068-231ENSMUST00000225862 482 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm22807-201ENSMUST00000082737 129 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm22508-201ENSMUST00000082772 110 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sh3rf1Q69ZI1 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.34□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm11409-201ENSMUST00000118621 403 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm13009-201ENSMUST00000121307 267 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm26352-201ENSMUST00000158223 125 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Mir1963-201ENSMUST00000158594 59 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm25348-201ENSMUST00000158961 111 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm3170-201ENSMUST00000168753 850 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm3348-201ENSMUST00000177813 850 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28604-201ENSMUST00000186629 484 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28566-201ENSMUST00000186714 484 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms