Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm42955-201ENSMUST00000197355 3393 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm14520-201ENSMUST00000119258 387 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm13518-201ENSMUST00000120018 233 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm15223-201ENSMUST00000120989 826 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Scarna13-201ENSMUST00000158164 275 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm16569-201ENSMUST00000160526 314 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm27928-201ENSMUST00000183747 256 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm27541-201ENSMUST00000184078 122 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29512-201ENSMUST00000185544 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28110-201ENSMUST00000185782 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28838-201ENSMUST00000186338 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29057-201ENSMUST00000186468 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29661-201ENSMUST00000186781 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28737-201ENSMUST00000186808 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29118-201ENSMUST00000186908 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28433-201ENSMUST00000187085 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28683-201ENSMUST00000187134 615 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29635-201ENSMUST00000187221 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28759-201ENSMUST00000187621 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28831-201ENSMUST00000187739 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28200-201ENSMUST00000187778 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29026-201ENSMUST00000187787 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28752-201ENSMUST00000188340 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28797-201ENSMUST00000188543 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28855-201ENSMUST00000188680 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29378-201ENSMUST00000188723 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28569-201ENSMUST00000188748 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28120-201ENSMUST00000188812 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28369-201ENSMUST00000188993 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29037-201ENSMUST00000189092 313 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28840-205ENSMUST00000189320 615 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28909-201ENSMUST00000189406 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28705-201ENSMUST00000189548 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28861-201ENSMUST00000189681 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29180-201ENSMUST00000190003 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28835-203ENSMUST00000190062 615 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28939-201ENSMUST00000190351 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm28223-201ENSMUST00000190469 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29575-201ENSMUST00000190597 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29092-201ENSMUST00000190768 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm29469-201ENSMUST00000191448 315 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm42570-201ENSMUST00000195937 292 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm31931-201ENSMUST00000219666 222 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 AC153646.2-201ENSMUST00000220516 109 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm23424-201ENSMUST00000103889 110 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm27165-201ENSMUST00000183951 232 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm29489-201ENSMUST00000188934 324 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm36983-201ENSMUST00000192280 1102 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm9722-201ENSMUST00000194568 802 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm33952-201ENSMUST00000197795 408 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm45215-201ENSMUST00000206407 395 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm20368-201ENSMUST00000220716 301 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 AL627387.1-201ENSMUST00000226063 250 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 AC158142.2-201ENSMUST00000227892 635 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm7808-201ENSMUST00000082002 387 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rc3h1Q4VGL6 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms