Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CtcfQ61164 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CtcfQ61164 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CtcfQ61164 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CtcfQ61164 Mir346-201ENSMUST00000083547 98 ntBASIC4.54□□□□□ -1.68
CtcfQ61164 Gm22829-201ENSMUST00000083771 106 ntBASIC4.54□□□□□ -1.68
CtcfQ61164 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CtcfQ61164 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.54□□□□□ -1.68
CtcfQ61164 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CtcfQ61164 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.54□□□□□ -1.68
CtcfQ61164 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CtcfQ61164 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CtcfQ61164 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.54□□□□□ -1.68
CtcfQ61164 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.53□□□□□ -1.68
CtcfQ61164 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CtcfQ61164 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CtcfQ61164 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CtcfQ61164 Gm25097-201ENSMUST00000104042 145 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm26019-201ENSMUST00000104407 119 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm22899-201ENSMUST00000104540 131 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm11406-201ENSMUST00000117418 484 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm15926-201ENSMUST00000120492 550 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm14162-201ENSMUST00000121985 601 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.53□□□□□ -1.68
CtcfQ61164 Gm26085-201ENSMUST00000157900 116 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm24393-201ENSMUST00000158135 97 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm17159-201ENSMUST00000169043 482 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.53□□□□□ -1.68
CtcfQ61164 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CtcfQ61164 Gm28471-201ENSMUST00000185994 615 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm28598-201ENSMUST00000186490 615 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CtcfQ61164 Gm29268-201ENSMUST00000188669 615 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CtcfQ61164 Gm29218-205ENSMUST00000190846 615 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm28978-201ENSMUST00000191120 615 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm37172-201ENSMUST00000191926 615 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm38046-201ENSMUST00000192733 550 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm43730-201ENSMUST00000199863 372 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Gm44032-201ENSMUST00000204841 166 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
CtcfQ61164 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.53□□□□□ -1.68
CtcfQ61164 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CtcfQ61164 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.53□□□□□ -1.68
CtcfQ61164 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CtcfQ61164 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CtcfQ61164 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.53□□□□□ -1.68
CtcfQ61164 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CtcfQ61164 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CtcfQ61164 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.53□□□□□ -1.68
CtcfQ61164 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CtcfQ61164 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CtcfQ61164 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CtcfQ61164 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CtcfQ61164 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CtcfQ61164 Mir582-201ENSMUST00000103758 81 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm22657-201ENSMUST00000104197 132 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm6429-201ENSMUST00000117144 475 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm15426-201ENSMUST00000117823 556 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm12328-201ENSMUST00000118611 197 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm11404-201ENSMUST00000120872 494 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm25606-201ENSMUST00000158363 95 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm15974-201ENSMUST00000159103 531 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm22252-201ENSMUST00000179316 79 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm27875-201ENSMUST00000184425 123 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm27163-201ENSMUST00000184767 409 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm38149-201ENSMUST00000191943 339 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm37088-201ENSMUST00000193887 406 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Gm45912-201ENSMUST00000210646 543 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 AL772265.1-201ENSMUST00000214379 305 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 AL935138.1-201ENSMUST00000215309 196 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 AC166358.6-201ENSMUST00000221834 1206 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 AC125523.1-201ENSMUST00000228018 934 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CtcfQ61164 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm25135-201ENSMUST00000082648 143 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.52□□□□□ -1.69
CtcfQ61164 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CtcfQ61164 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.51□□□□□ -1.69
CtcfQ61164 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms