Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm42547-201ENSMUST00000201159 3798 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 BC022960-201ENSMUST00000119987 1815 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm2979-201ENSMUST00000193442 463 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm37575-201ENSMUST00000195467 309 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm44712-201ENSMUST00000206250 1076 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 AC133283.1-201ENSMUST00000228443 859 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm23140-201ENSMUST00000082487 107 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm8338-201ENSMUST00000163928 363 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm37664-201ENSMUST00000194607 3813 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm24819-201ENSMUST00000175094 166 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm37698-201ENSMUST00000192605 463 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Trbv9-201ENSMUST00000194494 290 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm42919-201ENSMUST00000197753 1284 ntBASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ush2AQ2QI47 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm23289-201ENSMUST00000175615 108 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm43512-201ENSMUST00000198495 176 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm18306-201ENSMUST00000207338 569 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Mir322-201ENSMUST00000083484 95 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 AC126673.3-201ENSMUST00000223414 3829 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm24210-201ENSMUST00000158263 133 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 AC153948.1-201ENSMUST00000219080 3838 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Mir7017-201ENSMUST00000184894 62 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm38283-201ENSMUST00000193041 695 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm44623-201ENSMUST00000207934 434 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm10025-201ENSMUST00000079568 372 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm38031-201ENSMUST00000191819 3015 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm45223-201ENSMUST00000207037 5138 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Mir758-201ENSMUST00000103260 81 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm15536-201ENSMUST00000121411 114 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm24840-201ENSMUST00000122603 147 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm44431-201ENSMUST00000203500 413 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 AC134596.2-201ENSMUST00000222158 171 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 AC117588.3-201ENSMUST00000228517 325 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Gm10343-201ENSMUST00000096279 348 ntBASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC1.7□□□□□ -2.14
Ush2AQ2QI47 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms