Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm21529-201ENSMUST00000180175 498 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm29370-202ENSMUST00000187476 499 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cacna1bO55017 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cacna1bO55017 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm23011-201ENSMUST00000104148 132 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.05□□□□□ -1.92
Cacna1bO55017 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm22187-201ENSMUST00000157819 129 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm26028-201ENSMUST00000158660 294 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm16566-201ENSMUST00000160387 910 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm20660-201ENSMUST00000177515 289 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm19620-201ENSMUST00000195972 434 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm43521-201ENSMUST00000197838 255 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm43107-201ENSMUST00000198729 255 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 AC159256.1-201ENSMUST00000224298 1039 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cacna1bO55017 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.05□□□□□ -1.92
Cacna1bO55017 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.05□□□□□ -1.92
Cacna1bO55017 Gm13167-201ENSMUST00000118554 578 ntBASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm32175-201ENSMUST00000193641 346 ntBASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm5176-202ENSMUST00000220267 583 ntBASIC3.04□□□□□ -1.92
Cacna1bO55017 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cacna1bO55017 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm12787-201ENSMUST00000119234 396 ntBASIC3.04□□□□□ -1.92
Cacna1bO55017 Mir5118-201ENSMUST00000175551 67 ntBASIC3.04□□□□□ -1.92
Cacna1bO55017 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm25820-201ENSMUST00000198589 127 ntBASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.04□□□□□ -1.92
Cacna1bO55017 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cacna1bO55017 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Cacna1bO55017 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm14570-201ENSMUST00000119444 391 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm17117-201ENSMUST00000163665 299 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Mir6401-201ENSMUST00000184499 109 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm43717-201ENSMUST00000198684 310 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm44688-201ENSMUST00000209083 537 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Cacna1bO55017 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Cacna1bO55017 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.03□□□□□ -1.92
Cacna1bO55017 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Cacna1bO55017 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Cacna1bO55017 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.03□□□□□ -1.92
Cacna1bO55017 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Cacna1bO55017 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Cacna1bO55017 AC160931.3-201ENSMUST00000222111 2267 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm8260-201ENSMUST00000119230 353 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm16327-201ENSMUST00000137146 228 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm45498-201ENSMUST00000210346 283 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.03□□□□□ -1.92
Cacna1bO55017 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Cacna1bO55017 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.03□□□□□ -1.93
Cacna1bO55017 Svet1-201ENSMUST00000209370 3940 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cacna1bO55017 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Mir291a-201ENSMUST00000104815 82 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm12568-201ENSMUST00000117362 624 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm13379-201ENSMUST00000118053 621 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm9208-201ENSMUST00000120468 948 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm10075-201ENSMUST00000162030 545 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm5527-201ENSMUST00000179821 642 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm8319-201ENSMUST00000205708 641 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cacna1bO55017 Gm22979-201ENSMUST00000082609 159 ntBASIC3.02□□□□□ -1.93
Cacna1bO55017 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms