Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm24819-201ENSMUST00000175094 166 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm23714-201ENSMUST00000179259 105 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Mir6406-201ENSMUST00000183592 120 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm34314-201ENSMUST00000203622 367 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm2987-201ENSMUST00000187673 1693 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Gm12222-201ENSMUST00000121368 260 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a3E9PWQ3 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm12878-201ENSMUST00000118744 332 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm8121-201ENSMUST00000153583 499 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm24757-201ENSMUST00000176987 371 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm23551-201ENSMUST00000116852 121 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm3123-201ENSMUST00000163480 480 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm43722-201ENSMUST00000196054 124 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm43975-201ENSMUST00000203023 481 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Gm45879-201ENSMUST00000212521 392 ntBASIC3.17□□□□□ -1.9
Col6a3E9PWQ3 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm24670-201ENSMUST00000104154 132 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Mir3058-201ENSMUST00000175126 91 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm28141-201ENSMUST00000186676 342 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm43765-201ENSMUST00000196303 893 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm13459-201ENSMUST00000121558 646 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm26004-201ENSMUST00000158804 116 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm19253-201ENSMUST00000204279 307 ntBASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a3E9PWQ3 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a3E9PWQ3 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a3E9PWQ3 Gm13650-201ENSMUST00000117729 433 ntBASIC3.15□□□□□ -1.9
Col6a3E9PWQ3 Gm22600-201ENSMUST00000157598 269 ntBASIC3.15□□□□□ -1.9
Col6a3E9PWQ3 Gm22383-201ENSMUST00000158188 327 ntBASIC3.15□□□□□ -1.9
Col6a3E9PWQ3 Mir6997-201ENSMUST00000184313 71 ntBASIC3.15□□□□□ -1.9
Col6a3E9PWQ3 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col6a3E9PWQ3 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col6a3E9PWQ3 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Gm42474-201ENSMUST00000201073 505 ntBASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Gm44523-201ENSMUST00000205616 417 ntBASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col6a3E9PWQ3 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms