Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Gm715-201ENSMUST00000117865 831 ntBASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Gm12085-201ENSMUST00000119263 940 ntBASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5538W4VSP6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5538W4VSP6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5538W4VSP6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5538W4VSP6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5538W4VSP6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm5538W4VSP6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms