Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm38285-201ENSMUST00000192928 922 ntBASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm18025-201ENSMUST00000221733 862 ntBASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl40Q9Z2Q5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl40Q9Z2Q5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm8969-201ENSMUST00000199694 526 ntBASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm9987-201ENSMUST00000069768 567 ntBASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl40Q9Z2Q5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.33■□□□□ 0.37
Mrpl40Q9Z2Q5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Mrpl40Q9Z2Q5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl40Q9Z2Q5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms