Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Gm21559-201ENSMUST00000220638 855 ntBASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Gm8587-201ENSMUST00000076538 843 ntBASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Smarcb1Q9Z0H3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Gm7213-201ENSMUST00000215977 950 ntBASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Smarcb1Q9Z0H3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcb1Q9Z0H3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.97■□□□□ 0.47
Smarcb1Q9Z0H3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcb1Q9Z0H3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smarcb1Q9Z0H3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Smarcb1Q9Z0H3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms