Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.28■□□□□ 0.2
Lhx6Q9R1R0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Gm28659-201ENSMUST00000188013 759 ntBASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Gm37292-201ENSMUST00000192062 758 ntBASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx6Q9R1R0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx6Q9R1R0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Lhx6Q9R1R0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx6Q9R1R0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx6Q9R1R0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Gm15375-201ENSMUST00000119510 849 ntBASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 AC140209.1-201ENSMUST00000227875 284 ntBASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lhx6Q9R1R0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Lhx6Q9R1R0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms