Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col13a1Q9R1N9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Gm21559-201ENSMUST00000220638 855 ntBASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Gm8587-201ENSMUST00000076538 843 ntBASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col13a1Q9R1N9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col13a1Q9R1N9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col13a1Q9R1N9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms