Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Clcn2Q9R0A1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Gm11927-201ENSMUST00000118472 759 ntBASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Zfp783-201ENSMUST00000095946 670 ntBASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn2Q9R0A1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn2Q9R0A1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Flg-201ENSMUST00000050758 1488 ntBASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn2Q9R0A1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.71■□□□□ 0.42
Clcn2Q9R0A1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Gm5643-201ENSMUST00000117081 966 ntBASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Gm38285-201ENSMUST00000192928 922 ntBASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Clcn2Q9R0A1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms