Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Gm10493-201ENSMUST00000097270 612 ntBASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf13bQ9ET35 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.67□□□□□ -0.22
Tnfrsf13bQ9ET35 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf13bQ9ET35 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Gm13401-201ENSMUST00000117074 291 ntBASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Gm10033-202ENSMUST00000211874 928 ntBASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Zfp783-201ENSMUST00000095946 670 ntBASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Tnfrsf13bQ9ET35 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Tnfrsf13bQ9ET35 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm2399-201ENSMUST00000104944 225 ntBASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Mir2861-201ENSMUST00000175539 82 ntBASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms