Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Gm26833-201ENSMUST00000180899 440 ntBASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ube4bQ9ES00 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ube4bQ9ES00 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.7■□□□□ 0.26
Ube4bQ9ES00 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.7■□□□□ 0.26
Ube4bQ9ES00 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ube4bQ9ES00 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Gm43017-201ENSMUST00000198296 752 ntBASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ube4bQ9ES00 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms