Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Mmp1bQ9EPL6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Gm7290-201ENSMUST00000104990 617 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Gm12918-201ENSMUST00000120234 636 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Gm15710-201ENSMUST00000121821 636 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Gm5075-201ENSMUST00000196916 622 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mmp1bQ9EPL6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp1bQ9EPL6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Gm6365-201ENSMUST00000054711 744 ntBASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp1bQ9EPL6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp1bQ9EPL6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.27■□□□□ 0.03
Mmp1bQ9EPL6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp1bQ9EPL6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Mmp1bQ9EPL6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp1bQ9EPL6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.27■□□□□ 0.03
Mmp1bQ9EPL6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp1bQ9EPL6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms