Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Calr3Q9D9Q6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Calr3Q9D9Q6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Calr3Q9D9Q6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Calr3Q9D9Q6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Calr3Q9D9Q6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Calr3Q9D9Q6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Gm10418-201ENSMUST00000100943 576 ntBASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Gm13146-201ENSMUST00000118508 780 ntBASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Gm13534-201ENSMUST00000121169 513 ntBASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Calr3Q9D9Q6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Calr3Q9D9Q6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Calr3Q9D9Q6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Calr3Q9D9Q6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Calr3Q9D9Q6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Calr3Q9D9Q6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Calr3Q9D9Q6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.85■□□□□ 0.45
Calr3Q9D9Q6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Calr3Q9D9Q6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Calr3Q9D9Q6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Calr3Q9D9Q6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms