Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp5Q9D7S9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp5Q9D7S9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Hivep3-201ENSMUST00000084306 2973 ntBASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp5Q9D7S9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp5Q9D7S9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Gm6211-202ENSMUST00000167849 925 ntBASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Mir2861-201ENSMUST00000175539 82 ntBASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Gm44549-201ENSMUST00000208351 577 ntBASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Gm5874-201ENSMUST00000096101 508 ntBASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Chmp5Q9D7S9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp5Q9D7S9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Gm7290-201ENSMUST00000104990 617 ntBASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Gm12918-201ENSMUST00000120234 636 ntBASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Gm15710-201ENSMUST00000121821 636 ntBASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Gm5075-201ENSMUST00000196916 622 ntBASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp5Q9D7S9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms