Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stag1Q9D3E6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag1Q9D3E6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Mir8112-201ENSMUST00000184382 131 ntBASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag1Q9D3E6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Gm14859-201ENSMUST00000117752 357 ntBASIC20.65■□□□□ 0.9
Stag1Q9D3E6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Gm5587-201ENSMUST00000206270 674 ntBASIC20.65■□□□□ 0.9
Stag1Q9D3E6 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Stag1Q9D3E6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Stag1Q9D3E6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Stag1Q9D3E6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Stag1Q9D3E6 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.64■□□□□ 0.89
Stag1Q9D3E6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag1Q9D3E6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.64■□□□□ 0.89
Stag1Q9D3E6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.64■□□□□ 0.89
Stag1Q9D3E6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Stag1Q9D3E6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag1Q9D3E6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Stag1Q9D3E6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag1Q9D3E6 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Gm9013-201ENSMUST00000132939 882 ntBASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag1Q9D3E6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Stag1Q9D3E6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Stag1Q9D3E6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Stag1Q9D3E6 Ank2-226ENSMUST00000189368 339 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms