Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Chaf1bQ9D0N7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chaf1bQ9D0N7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chaf1bQ9D0N7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1bQ9D0N7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms