Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1lQ9CXF7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1lQ9CXF7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Gm13234-201ENSMUST00000120010 747 ntBASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Nespas-201ENSMUST00000143738 1083 ntBASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd1lQ9CXF7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd1lQ9CXF7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd1lQ9CXF7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd1lQ9CXF7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Gm29791-202ENSMUST00000207888 369 ntBASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Chd1lQ9CXF7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1lQ9CXF7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Chd1lQ9CXF7 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.61■□□□□ 0.73
Chd1lQ9CXF7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1lQ9CXF7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Chd1lQ9CXF7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms