Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Idnk-204ENSMUST00000226010 1898 ntBASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc43Q9CR29 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Gm8969-201ENSMUST00000199694 526 ntBASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc43Q9CR29 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Gm12441-201ENSMUST00000121806 588 ntBASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc43Q9CR29 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Mtag2-201ENSMUST00000058665 714 ntBASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc43Q9CR29 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc43Q9CR29 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc43Q9CR29 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc43Q9CR29 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc43Q9CR29 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc43Q9CR29 Gm27275-201ENSMUST00000184318 272 ntBASIC19.27■□□□□ 0.68
Ccdc43Q9CR29 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ccdc43Q9CR29 Dio3-201ENSMUST00000097228 1449 ntBASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc43Q9CR29 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms