Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Gm24841-201ENSMUST00000158676 357 ntBASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retreg3Q9CQV4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retreg3Q9CQV4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Gm12085-201ENSMUST00000119263 940 ntBASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retreg3Q9CQV4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retreg3Q9CQV4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Gm28196-201ENSMUST00000187719 640 ntBASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Gm37102-201ENSMUST00000195740 1105 ntBASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retreg3Q9CQV4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retreg3Q9CQV4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.39■□□□□ 0.37
Retreg3Q9CQV4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms