Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.23□□□□□ -0.13
H2afb1Q9CQ70 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.23□□□□□ -0.13
H2afb1Q9CQ70 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb1Q9CQ70 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb1Q9CQ70 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Gm12896-201ENSMUST00000118430 226 ntBASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb1Q9CQ70 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb1Q9CQ70 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb1Q9CQ70 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
H2afb1Q9CQ70 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H2afb1Q9CQ70 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Gm11249-201ENSMUST00000117071 859 ntBASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb1Q9CQ70 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Gm13158-201ENSMUST00000122007 736 ntBASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Gm6576-201ENSMUST00000169678 883 ntBASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb1Q9CQ70 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms