Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.21■□□□□ 0.03
Scrt1Q99M85 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scrt1Q99M85 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.21■□□□□ 0.03
Scrt1Q99M85 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.21■□□□□ 0.02
Scrt1Q99M85 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scrt1Q99M85 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scrt1Q99M85 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scrt1Q99M85 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.2■□□□□ 0.02
Scrt1Q99M85 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scrt1Q99M85 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scrt1Q99M85 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.19■□□□□ 0.02
Scrt1Q99M85 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scrt1Q99M85 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Gm38027-201ENSMUST00000192315 235 ntBASIC15.18■□□□□ 0.02
Scrt1Q99M85 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.18■□□□□ 0.02
Scrt1Q99M85 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.18■□□□□ 0.02
Scrt1Q99M85 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scrt1Q99M85 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.17■□□□□ 0.02
Scrt1Q99M85 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.17■□□□□ 0.02
Scrt1Q99M85 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scrt1Q99M85 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scrt1Q99M85 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms