Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc44a3Q921V7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc44a3Q921V7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc44a3Q921V7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc44a3Q921V7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc44a3Q921V7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc44a3Q921V7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc44a3Q921V7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Gm15378-201ENSMUST00000121894 207 ntBASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Gm43183-201ENSMUST00000200632 547 ntBASIC17.16■□□□□ 0.34
Slc44a3Q921V7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.16■□□□□ 0.34
Slc44a3Q921V7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc44a3Q921V7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc44a3Q921V7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Gm4974-201ENSMUST00000209974 875 ntBASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc44a3Q921V7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Slc44a3Q921V7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Gm10698-201ENSMUST00000182663 604 ntBASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Gm10517-202ENSMUST00000192970 758 ntBASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a3Q921V7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.12■□□□□ 0.33
Slc44a3Q921V7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a3Q921V7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms