Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20■□□□□ 0.79
Smc1bQ920F6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smc1bQ920F6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc1bQ920F6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.98■□□□□ 0.79
Smc1bQ920F6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.97■□□□□ 0.79
Smc1bQ920F6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.97■□□□□ 0.79
Smc1bQ920F6 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.97■□□□□ 0.79
Smc1bQ920F6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.97■□□□□ 0.79
Smc1bQ920F6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc1bQ920F6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Gm2274-201ENSMUST00000184539 609 ntBASIC19.96■□□□□ 0.79
Smc1bQ920F6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc1bQ920F6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.96■□□□□ 0.79
Smc1bQ920F6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smc1bQ920F6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Smc1bQ920F6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.95■□□□□ 0.78
Smc1bQ920F6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc1bQ920F6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.95■□□□□ 0.78
Smc1bQ920F6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Smc1bQ920F6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms