Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga9Q91XX9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga9Q91XX9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Gm10517-202ENSMUST00000192970 758 ntBASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Gm5417-201ENSMUST00000079706 384 ntBASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga9Q91XX9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga9Q91XX9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhga9Q91XX9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms