Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d19Q91X43 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Gm18032-201ENSMUST00000222541 538 ntBASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d19Q91X43 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3d19Q91X43 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.08■□□□□ 0.49
Sh3d19Q91X43 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Sh3d19Q91X43 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3d19Q91X43 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3d19Q91X43 Gm16061-201ENSMUST00000122167 857 ntBASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Gm7370-201ENSMUST00000219471 767 ntBASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d19Q91X43 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Mir5130-201ENSMUST00000175160 84 ntBASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d19Q91X43 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d19Q91X43 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d19Q91X43 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d19Q91X43 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.04■□□□□ 0.48
Sh3d19Q91X43 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms