Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Gm11249-201ENSMUST00000117071 859 ntBASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Gm15375-201ENSMUST00000119510 849 ntBASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H1fooQ8VIK3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H1fooQ8VIK3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Gm13401-201ENSMUST00000117074 291 ntBASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Mir8112-201ENSMUST00000184382 131 ntBASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H1fooQ8VIK3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Gm12441-201ENSMUST00000121806 588 ntBASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Gm13158-201ENSMUST00000122007 736 ntBASIC14.53□□□□□ -0.08
H1fooQ8VIK3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Gm27275-201ENSMUST00000184318 272 ntBASIC14.53□□□□□ -0.08
H1fooQ8VIK3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H1fooQ8VIK3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
H1fooQ8VIK3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms