Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap2Q8VC34 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap2Q8VC34 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap2Q8VC34 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap2Q8VC34 Gm12085-201ENSMUST00000119263 940 ntBASIC19.04■□□□□ 0.64
Rpap2Q8VC34 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap2Q8VC34 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.04■□□□□ 0.64
Rpap2Q8VC34 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap2Q8VC34 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap2Q8VC34 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap2Q8VC34 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap2Q8VC34 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Timm23-208ENSMUST00000226683 750 ntBASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap2Q8VC34 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Gm38027-201ENSMUST00000192315 235 ntBASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap2Q8VC34 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpap2Q8VC34 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpap2Q8VC34 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rpap2Q8VC34 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Rpap2Q8VC34 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Rpap2Q8VC34 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Odf3b-204ENSMUST00000227834 930 ntBASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap2Q8VC34 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap2Q8VC34 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19■□□□□ 0.63
Rpap2Q8VC34 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rpap2Q8VC34 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap2Q8VC34 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap2Q8VC34 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap2Q8VC34 Gm37025-201ENSMUST00000195159 829 ntBASIC19■□□□□ 0.63
Rpap2Q8VC34 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms