Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3kbp1Q8R550 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Gm11539-201ENSMUST00000119837 557 ntBASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Gm13436-201ENSMUST00000120418 567 ntBASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Gm13559-201ENSMUST00000120476 863 ntBASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Gm3375-201ENSMUST00000203929 796 ntBASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sh3kbp1Q8R550 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sh3kbp1Q8R550 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.89■□□□□ 0.46
Sh3kbp1Q8R550 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Sh3kbp1Q8R550 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sh3kbp1Q8R550 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Timm23-208ENSMUST00000226683 750 ntBASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Odf3b-204ENSMUST00000227834 930 ntBASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh3kbp1Q8R550 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3kbp1Q8R550 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3kbp1Q8R550 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms