Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Gm37292-201ENSMUST00000192062 758 ntBASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ubqln1Q8R317 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ubqln1Q8R317 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Gm12382-201ENSMUST00000122005 922 ntBASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubqln1Q8R317 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Gm43183-201ENSMUST00000200632 547 ntBASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ubqln1Q8R317 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubqln1Q8R317 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.42■□□□□ 0.22
Ubqln1Q8R317 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Gm10698-201ENSMUST00000182663 604 ntBASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ubqln1Q8R317 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubqln1Q8R317 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubqln1Q8R317 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubqln1Q8R317 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubqln1Q8R317 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ubqln1Q8R317 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.41■□□□□ 0.22
Ubqln1Q8R317 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubqln1Q8R317 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms