Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim68Q8K243 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.83■□□□□ 0.61
Trim68Q8K243 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim68Q8K243 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim68Q8K243 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.83■□□□□ 0.6
Trim68Q8K243 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trim68Q8K243 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim68Q8K243 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim68Q8K243 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim68Q8K243 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim68Q8K243 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim68Q8K243 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim68Q8K243 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim68Q8K243 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim68Q8K243 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim68Q8K243 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim68Q8K243 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim68Q8K243 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim68Q8K243 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim68Q8K243 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim68Q8K243 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Trim68Q8K243 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim68Q8K243 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim68Q8K243 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Gm7284-201ENSMUST00000131667 944 ntBASIC18.8■□□□□ 0.6
Trim68Q8K243 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim68Q8K243 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.8■□□□□ 0.6
Trim68Q8K243 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim68Q8K243 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim68Q8K243 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim68Q8K243 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim68Q8K243 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.79■□□□□ 0.6
Trim68Q8K243 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim68Q8K243 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Gm22697-201ENSMUST00000175194 63 ntBASIC18.79■□□□□ 0.6
Trim68Q8K243 Gm2274-201ENSMUST00000184539 609 ntBASIC18.79■□□□□ 0.6
Trim68Q8K243 Gm18101-201ENSMUST00000215769 548 ntBASIC18.79■□□□□ 0.6
Trim68Q8K243 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim68Q8K243 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.79■□□□□ 0.6
Trim68Q8K243 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim68Q8K243 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim68Q8K243 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim68Q8K243 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms