Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm44771-201ENSMUST00000206975 626 ntBASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn4rl1Q8K0S5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4rl1Q8K0S5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Birc2-201ENSMUST00000054878 378 ntBASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4rl1Q8K0S5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4rl1Q8K0S5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.53■□□□□ 0.4
Rtn4rl1Q8K0S5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4rl1Q8K0S5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4rl1Q8K0S5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4rl1Q8K0S5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4rl1Q8K0S5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4rl1Q8K0S5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.52■□□□□ 0.4
Rtn4rl1Q8K0S5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Rtn4rl1Q8K0S5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms