Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.65■□□□□ 0.74
Syne4Q8CII8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syne4Q8CII8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Syne4Q8CII8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Syne4Q8CII8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Syne4Q8CII8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Syne4Q8CII8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syne4Q8CII8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Mir8098-201ENSMUST00000184011 137 ntBASIC19.64■□□□□ 0.73
Syne4Q8CII8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Syne4Q8CII8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.64■□□□□ 0.73
Syne4Q8CII8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syne4Q8CII8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.63■□□□□ 0.73
Syne4Q8CII8 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.63■□□□□ 0.73
Syne4Q8CII8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Syne4Q8CII8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Gm43347-201ENSMUST00000200226 580 ntBASIC19.62■□□□□ 0.73
Syne4Q8CII8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne4Q8CII8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Gm13884-201ENSMUST00000118103 829 ntBASIC19.61■□□□□ 0.73
Syne4Q8CII8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.61■□□□□ 0.73
Syne4Q8CII8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.61■□□□□ 0.73
Syne4Q8CII8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne4Q8CII8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Gm12895-201ENSMUST00000122214 226 ntBASIC19.6■□□□□ 0.73
Syne4Q8CII8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne4Q8CII8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne4Q8CII8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne4Q8CII8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne4Q8CII8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.59■□□□□ 0.73
Syne4Q8CII8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Syne4Q8CII8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne4Q8CII8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.59■□□□□ 0.73
Syne4Q8CII8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne4Q8CII8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne4Q8CII8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms