Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim52Q8CDV4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Gm11950-201ENSMUST00000121615 838 ntBASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim52Q8CDV4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Gm27000-201ENSMUST00000182943 842 ntBASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim52Q8CDV4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim52Q8CDV4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim52Q8CDV4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim52Q8CDV4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim52Q8CDV4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim52Q8CDV4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim52Q8CDV4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim52Q8CDV4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim52Q8CDV4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Trim52Q8CDV4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim52Q8CDV4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Mir770-201ENSMUST00000103252 94 ntBASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim52Q8CDV4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms