Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cabcoco1Q8CDT7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cabcoco1Q8CDT7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cabcoco1Q8CDT7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.11■□□□□ 0.33
Cabcoco1Q8CDT7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cabcoco1Q8CDT7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cabcoco1Q8CDT7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Gm13234-201ENSMUST00000120010 747 ntBASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cabcoco1Q8CDT7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cabcoco1Q8CDT7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cabcoco1Q8CDT7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cabcoco1Q8CDT7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cabcoco1Q8CDT7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cabcoco1Q8CDT7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cabcoco1Q8CDT7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms