Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Gm13168-201ENSMUST00000121771 632 ntBASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vcpip1Q8CDG3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Dio3-201ENSMUST00000097228 1449 ntBASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcpip1Q8CDG3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcpip1Q8CDG3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcpip1Q8CDG3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Mtag2-201ENSMUST00000058665 714 ntBASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Gm10812-201ENSMUST00000099864 546 ntBASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcpip1Q8CDG3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms