Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shisa4Q8CA71 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Gm9731-201ENSMUST00000209480 747 ntBASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shisa4Q8CA71 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Il3ra-202ENSMUST00000223589 738 ntBASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shisa4Q8CA71 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Gm7889-201ENSMUST00000185591 958 ntBASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Gm37025-201ENSMUST00000195159 829 ntBASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.23■□□□□ 0.83
Shisa4Q8CA71 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shisa4Q8CA71 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shisa4Q8CA71 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms