Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Gm8520-201ENSMUST00000186517 868 ntBASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim9Q8C7M3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim9Q8C7M3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.14■□□□□ 0.66
Trim9Q8C7M3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim9Q8C7M3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim9Q8C7M3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim9Q8C7M3 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.13■□□□□ 0.65
Trim9Q8C7M3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim9Q8C7M3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim9Q8C7M3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim9Q8C7M3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim9Q8C7M3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim9Q8C7M3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim9Q8C7M3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim9Q8C7M3 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Mir1199-201ENSMUST00000117015 119 ntBASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim9Q8C7M3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim9Q8C7M3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms