Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim47Q8C0E3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim47Q8C0E3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim47Q8C0E3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim47Q8C0E3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Gm10231-201ENSMUST00000181584 441 ntBASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Gm10175-202ENSMUST00000208752 441 ntBASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim47Q8C0E3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim47Q8C0E3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Gm37025-201ENSMUST00000195159 829 ntBASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim47Q8C0E3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim47Q8C0E3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Gm7977-201ENSMUST00000193787 748 ntBASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim47Q8C0E3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim47Q8C0E3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim47Q8C0E3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim47Q8C0E3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim47Q8C0E3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim47Q8C0E3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim47Q8C0E3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim47Q8C0E3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms