Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sh3rf2Q8BZT2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Gm6345-202ENSMUST00000180900 204 ntBASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf2Q8BZT2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sh3rf2Q8BZT2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.58■□□□□ 0.41
Sh3rf2Q8BZT2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Sh3rf2Q8BZT2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Gm27389-201ENSMUST00000183622 195 ntBASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf2Q8BZT2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3rf2Q8BZT2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms