Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4Q8BQZ5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Idnk-204ENSMUST00000226010 1898 ntBASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4Q8BQZ5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Gm38285-201ENSMUST00000192928 922 ntBASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Gm8969-201ENSMUST00000199694 526 ntBASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Cpsf4Q8BQZ5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Cpsf4Q8BQZ5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Gm18666-201ENSMUST00000190039 958 ntBASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf4Q8BQZ5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Gm10812-201ENSMUST00000099864 546 ntBASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf4Q8BQZ5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.81■□□□□ 0.28
Cpsf4Q8BQZ5 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms