Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smco3Q8BQM7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smco3Q8BQM7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.34□□□□□ -0.11
Smco3Q8BQM7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smco3Q8BQM7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.33□□□□□ -0.12
Smco3Q8BQM7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smco3Q8BQM7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms