Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1bQ8BH88 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Gm10418-201ENSMUST00000100943 576 ntBASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1bQ8BH88 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Mir1199-201ENSMUST00000117015 119 ntBASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Mtag2-201ENSMUST00000058665 714 ntBASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1bQ8BH88 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Depdc1bQ8BH88 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Mir2861-201ENSMUST00000175539 82 ntBASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Depdc1bQ8BH88 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Gm10138-203ENSMUST00000206952 366 ntBASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Depdc1bQ8BH88 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Depdc1bQ8BH88 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Depdc1bQ8BH88 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.83■□□□□ 0.61
Depdc1bQ8BH88 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Depdc1bQ8BH88 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Depdc1bQ8BH88 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Depdc1bQ8BH88 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Depdc1bQ8BH88 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms